HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-3917
Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841
Genome Assembly:
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 55737149 55737349 + nbisL1-mrna-3917
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.99 7,483.63 Da 15.63 69.55 -0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039038851.1 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Hibiscus syriacus] 0
TrEMBL A0A6A2ZWH5 Kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110705pilonHSYRG00039 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg16354, jg35612
Aizoaceae Mesembryanthemum crystallinum 1 gene_14004
Amaranthaceae Atriplex hortensis 2 Ah001812, Ah013703
Amaranthaceae Beta vulgaris 2 BVRB_6g146580, BVRB_6g146590
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000002945, gene:ENSEOMG00000013235 ...
gene:ENSEOMG00000023463, gene:ENSEOMG00000025133, gene:ENSEOMG00000025889
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.5AG0016980, CQ.Regalona.r1.5AG0016990 ...
CQ.Regalona.r1.5BG0018430, CQ.Regalona.r1.6BG0004590
Anacardiaceae Pistacia vera 2 pistato.v30251920, pistato.v30251930
Arecaceae Cocos nucifera 7 COCNU_01G003660, COCNU_01G003670, COCNU_01G003680 ...
COCNU_01G003690, COCNU_01G003700, COCNU_01G003710, COCNU_01G003720
Arecaceae Phoenix dactylifera 2 gene-LOC103696942, gene-LOC103718031
Asteraceae Flaveria trinervia 4 Ftri15G00524, Ftri15G07362, Ftri15G16276, Ftri15G29009
Casuarinaceae Casuarina equisetifolia 7 Ceq02G0388, Ceq03G1276, Ceq04G2175, Ceq04G2191, Ceq04G2192 ...
Ceq04G2194, Ceq04G2195
Casuarinaceae Casuarina glauca 9 Cgl02G0412, Cgl03G1381, Cgl04G2368, Cgl04G2384, Cgl04G2387 ...
Cgl04G2388, Cgl04G2391, Cgl04G2392, Cgl04G2393
Malvaceae Hibiscus hamabo Siebold & Zucc. 4 nbisL1-mrna-22, nbisL1-mrna-23, nbisL1-mrna-3917 ...
nbisL1-mrna-9004
Nitrariaceae Nitraria sibirica 3 evm.TU.LG04.1611, evm.TU.LG04.1612, evm.TU.LG07.1605
Plantaginaceae Plantago ovata 2 Pov_00017187, Pov_00017191
Poaceae Echinochloa crus-galli 13 AH03.193, AH03.195, AH08.721, AH09.2557, AH09.2559, BH03.251 ...
CH03.311, CH03.313, CH03.314, CH08.848, CH09.2979, CH09.2981, CH09.2982
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_4AG0301090, gene-QOZ80_4AG0301100 ...
gene-QOZ80_4AG0301110, gene-QOZ80_4BG0331850, gene-QOZ80_4BG0331860, gene-QOZ80_7AG0555180, gene-QOZ80_7BG0586280, gene-QOZ80_8AG0622560, gene-QOZ80_8BG0650720
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.1HG0086900.1, HORVU.MOREX.r3.2HG0112180.1 ...
HORVU.MOREX.r3.2HG0137760.1, HORVU.MOREX.r3.2HG0202790.1, HORVU.MOREX.r3.2HG0202800.1, HORVU.MOREX.r3.2HG0202810.1, HORVU.MOREX.r3.6HG0614070.1, HORVU.MOREX.r3.6HG0614080.1, HORVU.MOREX.r3.6HG0634220.1, HORVU.MOREX.r3.7HG0662990.1
Poaceae Lolium multiflorum 12 gene-QYE76_042446, gene-QYE76_046806, gene-QYE76_046840 ...
gene-QYE76_046841, gene-QYE76_046843, gene-QYE76_046844, gene-QYE76_046845, gene-QYE76_047001, gene-QYE76_047002, gene-QYE76_047003, gene-QYE76_047016, gene-QYE76_047017
Poaceae Oryza coarctata 4 Oco07G017850, Oco07G017860, Oco12G009610, Oco13G001200
Poaceae Oryza sativa 10 LOC_Os01g73440.1, LOC_Os03g54070.1, LOC_Os04g56110.1 ...
LOC_Os04g56120.1, LOC_Os04g56130.1, LOC_Os06g13320.1, LOC_Os07g04810.1, LOC_Os07g04820.1, LOC_Os11g18980.1, LOC_Os11g25510.1
Poaceae Paspalum vaginatum 7 gene-BS78_02G030700, gene-BS78_02G030800 ...
gene-BS78_02G031200, gene-BS78_06G264800, gene-BS78_06G264900, gene-BS78_06G265100, gene-BS78_07G088200
Poaceae Puccinellia tenuiflora 5 Pt_Chr0200612, Pt_Chr0300580, Pt_Chr0400088, Pt_Chr0700195 ...
Pt_Chr0704056
Poaceae Sporobolus alterniflorus 9 Chr16G002990, Chr17G002670, Chr17G002910, Chr19G018070 ...
Chr23G002130, Chr26G017240, Chr30G001670, Chr30G001680, Chr30G001690
Poaceae Thinopyrum elongatum 14 Tel2E01G230500, Tel2E01G726500, Tel2E01G727100 ...
Tel2E01G852700, Tel2E01G852800, Tel2E01G852900, Tel2E01G853100, Tel2E01G853200, Tel2E01G927100, Tel6E01G542200, Tel6E01G793300, Tel6E01G793600, Tel6E01G794000, Tel6E01G794200
Poaceae Triticum dicoccoides 15 gene_TRIDC2AG061620, gene_TRIDC2AG070840 ...
gene_TRIDC2AG070860, gene_TRIDC2AG070870, gene_TRIDC2BG015470, gene_TRIDC2BG065450, gene_TRIDC2BG074000, gene_TRIDC2BG076570, gene_TRIDC2BG076600, gene_TRIDC2BG076610, gene_TRIDC2BG080740, gene_TRIDC6AG045480, gene_TRIDC6AG049940, gene_TRIDC6BG053130, gene_TRIDC6BG068090
Poaceae Triticum aestivum 18 TraesCS2A02G427900.1, TraesCS2A02G503700.1 ...
TraesCS2A02G503800.1, TraesCS2B02G448300.1.cds1, TraesCS2B02G531800.1, TraesCS2B02G532000.1, TraesCS2B02G532100.1, TraesCS2D02G105800.1.cds1, TraesCS2D02G105900.1, TraesCS2D02G425900.1, TraesCS2D02G504300.1, TraesCS2D02G504400.1, TraesCS6A02G301300.1, TraesCS6A02G334500.1.cds1, TraesCS6B02G470600.1, TraesCS6D02G280700.1, TraesCS7B02G463700.1, TraesCSU02G241700.1.cds1
Poaceae Zea mays 7 Zm00001eb005570_P001, Zm00001eb067820_P001 ...
Zm00001eb067890_P002, Zm00001eb067900_P001, Zm00001eb414140_P001, Zm00001eb432480_P001, Zm00001eb432490_P001
Poaceae Zoysia japonica 10 nbis-gene-23065, nbis-gene-35804, nbis-gene-35805 ...
nbis-gene-48985, nbis-gene-51774, nbis-gene-51776, nbis-gene-54143, nbis-gene-55135, nbis-gene-55361, nbis-gene-6061
Poaceae Zoysia macrostachya 6 Zma_g20587, Zma_g22123, Zma_g23800, Zma_g4724, Zma_g5949 ...
Zma_g5950
Portulacaceae Portulaca oleracea 2 evm.TU.LG01.2788, evm.TU.LG01.2793
Posidoniaceae Posidonia oceanica 1 gene.Posoc07g05610
Salicaceae Populus euphratica 1 populus_peu05425
Tamaricaceae Reaumuria soongarica 1 gene_4047
Tamaricaceae Tamarix chinensis 1 TC06G2477
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.