Basic Information
Locus ID:
nbisL1-mrna-3913
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001562F_pilon | 1676913 | 1682002 | - | nbisL1-mrna-3913 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 71,918.05 Da | 36.26 | 87.36 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 79 | 9.9E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 347 | 382 | 5.1E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 452 | 9.86E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 343 | 3.6E-82 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 345 | 469 | 1.0E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 0.0093 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 226 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 127 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 407 | 431 | 53.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 107 | 129 | 7.157505 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 500 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021642853.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KI27 | Putative receptor protein kinase TMK1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology