Basic Information
Locus ID:
nbisL1-mrna-3887
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 4220727 | 4226917 | - | nbisL1-mrna-3887 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 43,385.94 Da | 41.27 | 83.65 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 39 | 261 | 7.49992E-73 | IPR001220 |
| Pfam | PF04689 | DNA binding protein S1FA | 344 | 408 | 8.2E-39 | IPR006779 |
| Pfam | PF00139 | Legume lectin domain | 40 | 271 | 1.4E-58 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 275 | 5.6E-63 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 36 | 277 | 6.1E-66 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 150 | 156 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 324 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021608773.2 | L-type lectin-domain containing receptor kinase VIII.1 [Manihot esculenta] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W776 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G063500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology