Basic Information
Locus ID:
nbisL1-mrna-3859
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2967802 | 2970888 | + | nbisL1-mrna-3859 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 109,207.85 Da | 37.49 | 101.45 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 470 | 530 | 2.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 659 | 938 | 3.3E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 37 | 2.7E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 64 | 124 | 2.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 245 | 5.9E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 345 | 1.26E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 651 | 940 | 7.28E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 258 | 585 | 2.38E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 255 | 2.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 256 | 351 | 2.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 596 | 5.1E-57 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 737 | 960 | 1.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 147 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 640 | 736 | 3.1E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 517 | 541 | 74.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 657 | 917 | 2.5E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 111 | 135 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 208 | 232 | 2.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 469 | 493 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 159 | 184 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 657 | 944 | 37.71447 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 792 | 804 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 663 | 686 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021646548.1 | receptor-like protein kinase 5 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NFR4 | Serine-threonine protein kinase plant-type OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology