Basic Information
Locus ID:
nbisL1-mrna-3775
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2269048 | 2277649 | + | nbisL1-mrna-3775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 57,865.51 Da | 50.01 | 68.21 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 305 | 389 | 2.9E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 211 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_012076560.1 | protein WVD2-like 6 [Jatropha curcas] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KMZ0 | TPX2 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology