Basic Information
Locus ID:
nbisL1-mrna-3752
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54347853 | 54350861 | - | nbisL1-mrna-3752 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 41,696.19 Da | 39.98 | 88.27 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 313 | 1.27359E-106 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 308 | 8.8E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 311 | 1.22E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 329 | 3.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 115 | 4.6E-34 | - |
| SMART | SM00220 | serkin_6 | 40 | 311 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 319 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 370 | - | - |
| Coils | Coil | Coil | 305 | 325 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039053925.1 | PTI1-like tyrosine-protein kinase At3g15890 [Hibiscus syriacus] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2WE27 | PTI1-like tyrosine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117026pilonHSYRG00080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology