Basic Information
Locus ID:
nbisL1-mrna-3742
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54246219 | 54251491 | + | nbisL1-mrna-3742 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 96,202.60 Da | 35.69 | 89.03 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 572 | 839 | 1.83736E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 569 | 834 | 1.6E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 311 | 3.74E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 552 | 853 | 3.42E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 318 | 6.2E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 642 | 861 | 1.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 139 | 2.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 537 | 641 | 6.9E-35 | - |
| SMART | SM00220 | serkin_6 | 566 | 845 | 3.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 566 | 840 | 38.972397 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 572 | 594 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 686 | 698 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 875 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 863 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012451005.1 | leucine-rich repeat receptor protein kinase HPCA1 [Gossypium raimondii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D2UJ75 | Protein kinase domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_010G221900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology