Basic Information
Locus ID:
nbisL1-mrna-3705
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 53920470 | 53922814 | + | nbisL1-mrna-3705 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.36 | 22,579.54 Da | 51.55 | 72.56 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 170 | 206 | 9.67648E-19 | - |
| Pfam | PF19026 | HYPK UBA domain | 167 | 206 | 7.5E-13 | IPR044034 |
| Pfam | PF01849 | NAC domain | 69 | 124 | 4.5E-23 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 75 | 128 | 9.4E-32 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 168 | 205 | 3.7E-20 | - |
| SMART | SM01407 | NAC_2 | 69 | 125 | 1.6E-27 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 66 | 131 | 18.311571 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| Coils | Coil | Coil | 202 | 207 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_039060161.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Hibiscus syriacus] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3C545 | Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00010533pilonHSYRG00158 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology