Basic Information
Locus ID:
nbisL1-mrna-3693
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 3137710 | 3142462 | + | nbisL1-mrna-3693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 55,217.59 Da | 45.38 | 86.11 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 7.24182E-135 | - |
| CDD | cd00051 | EFh | 359 | 454 | 2.55591E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 312 | 7.3E-73 | IPR000719 |
| Pfam | PF00036 | EF hand | 359 | 386 | 2.4E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 402 | 454 | 2.1E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 480 | 2.06E-28 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 337 | 4.18E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 3.7E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 139 | 5.5E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 402 | 6.2E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 403 | 487 | 1.9E-16 | - |
| SMART | SM00220 | serkin_6 | 54 | 312 | 4.5E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 395 | 420 | 31.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 359 | 387 | 4.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 428 | 456 | 6.1E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 424 | 459 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 16.24292 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 47.382126 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 368 | 380 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 437 | 449 | - | IPR018247 |
| Coils | Coil | Coil | 377 | 397 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_031399555.1 | calcium-dependent protein kinase 13 [Punica granatum] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LN27 | Uncharacterized protein MANES_08G092800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology