Basic Information
Locus ID:
nbisL1-mrna-3643
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 8682151 | 8687025 | - | nbisL1-mrna-3643 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 59,765.58 Da | 42.28 | 80.04 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 72 | 251 | 3.4E-58 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 297 | 522 | 2.8E-72 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 78 | 346 | 5.8E-61 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 354 | 494 | 8.0E-24 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_002526061.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Ricinus communis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SJ92 | ribonuclease P OS=Ricinus communis OX=3988 GN=RCOM_1478990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology