Basic Information
Locus ID:
nbisL1-mrna-3620
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 2698645 | 2702121 | - | nbisL1-mrna-3620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 40,522.39 Da | 46.04 | 90.55 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 51 | 306 | 1.00021E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 47 | 306 | 2.8E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 321 | 1.35E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 125 | 7.0E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 336 | 4.4E-56 | - |
| SMART | SM00220 | serkin_6 | 45 | 310 | 2.5E-70 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 45 | 310 | 44.640133 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 51 | 72 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021620671.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2L6F0 | Protein kinase atn1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology