Basic Information
Locus ID:
nbisL1-mrna-3581
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
SAPK2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002179F_pilon | 4301363 | 4306366 | + | nbisL1-mrna-3581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 99,382.42 Da | 40.66 | 78.16 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01092 | Ribosomal protein S6e | 631 | 756 | 1.5E-53 | IPR001377 |
| Gene3D | G3DSA:1.20.5.2650 | - | 761 | 862 | 5.0E-38 | - |
| SMART | SM01405 | Ribosomal_S6e_2 | 629 | 756 | 2.7E-78 | IPR001377 |
| ProSitePatterns | PS00578 | Ribosomal protein S6e signature. | 680 | 691 | - | IPR018282 |
| Hamap | MF_00512 | 30S ribosomal protein S6e [rps6e]. | 309 | 745 | 14.043013 | IPR020924 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 865 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 491 | - | - |
| Coils | Coil | Coil | 438 | 458 | - | - |
| Coils | Coil | Coil | 94 | 128 | - | - |
| Coils | Coil | Coil | 382 | 416 | - | - |
| Coils | Coil | Coil | 262 | 346 | - | - |
| Coils | Coil | Coil | 354 | 374 | - | - |
| Coils | Coil | Coil | 817 | 844 | - | - |
| Coils | Coil | Coil | 220 | 254 | - | - |
| Coils | Coil | Coil | 164 | 191 | - | - |
| Coils | Coil | Coil | 70 | 90 | - | - |
| Coils | Coil | Coil | 12 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10360.1 | Ribosomal protein S6e. RPS6A and RPS6B are fully redundant and essential during gametogenesis. | 0 |
| RefSeq | XP_021637870.1 | 40S ribosomal protein S6-like [Hevea brasiliensis] | 0 |
| Q9M3V8 | Small ribosomal subunit protein eS6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K5B3 | 40S ribosomal protein S6 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology