Basic Information
Locus ID:
nbisL1-mrna-3566
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the glucose-6-phosphate 1-epimerase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 4344396 | 4351046 | - | nbisL1-mrna-3566 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 53,694.61 Da | 54.51 | 79.04 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 325 | 464 | 3.27758E-74 | IPR000608 |
| CDD | cd09020 | D-hex-6-P-epi_like | 27 | 295 | 7.11664E-111 | IPR025532 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 327 | 463 | 9.5E-53 | IPR000608 |
| Pfam | PF01263 | Aldose 1-epimerase | 25 | 296 | 2.5E-67 | IPR008183 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 19 | 297 | 3.45E-67 | IPR011013 |
| SUPERFAMILY | SSF54495 | UBC-like | 322 | 469 | 5.24E-66 | IPR016135 |
| Gene3D | G3DSA:2.70.98.10 | - | 3 | 299 | 1.7E-96 | IPR014718 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 319 | 470 | 1.1E-74 | IPR016135 |
| SMART | SM00212 | ubc_7 | 326 | 469 | 1.8E-80 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 323 | 469 | 62.149315 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 396 | 411 | - | IPR023313 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23730.1 | Galactose mutarotase-like superfamily protein. | 0 |
| RefSeq | XP_048231115.1 | putative glucose-6-phosphate 1-epimerase isoform X2 [Ricinus communis] | 0 |
| Q40784 | Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2Z7AJC8 | glucose-6-phosphate 1-epimerase OS=Dorcoceras hygrometricum OX=472368 GN=F511_05564 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology