Basic Information
Locus ID:
nbisL1-mrna-3546
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 7672428 | 7676550 | - | nbisL1-mrna-3546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 91,709.34 Da | 47.45 | 80.01 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 440 | 706 | 1.0244E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 437 | 703 | 2.8E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 414 | 704 | 5.6E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 405 | 508 | 1.6E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 713 | 3.1E-54 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 712 | 33.601479 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 555 | 567 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 244 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13690.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_025011899.1 | inactive protein kinase SELMODRAFT_444075 [Ricinus communis] | 0 |
| P0DH62 | Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_444075 PE=2 SV=1 | 0 | |
| TrEMBL | B9RFT6 | Protein kinase domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1437220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30097970 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03775 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1657 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3546 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13404 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14006 |