halophFGD

Basic Information

Locus ID: nbisL1-mrna-3507

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	51879954	51882032	-	nbisL1-mrna-3507

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.31	27,669.08 Da	37.10	74.00	-0.59

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	163	200	6.1E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	78	213	9.83E-22	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	66	161	2.2E-28	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	162	230	3.2E-9	-
MobiDBLite	mobidb-lite	consensus disorder prediction	216	235	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	216	236	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G00960.1	Protein kinase superfamily protein.
RefSeq	XP_016716830.1	putative receptor-like protein kinase At4g00960 [Gossypium hirsutum]
Swiss-Prot	O23082	Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2
TrEMBL	A0A5D2Q4T4	Protein kinase domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G142800v1 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Asteraceae	Flaveria trinervia	1	Ftri11G13932
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3507
Plumbaginaceae	Limonium bicolor	2	Lb4G22858, Lb4G22860