Basic Information
Locus ID:
nbisL1-mrna-3444
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 6654618 | 6659652 | - | nbisL1-mrna-3444 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 61,186.89 Da | 35.53 | 106.52 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 43 | 454 | 2.3E-62 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 155 | 208 | 1.2E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 36 | 464 | 1.6E-79 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 164 | 174 | 1.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 95 | 106 | 1.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 109 | 123 | 1.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 124 | 132 | 1.2E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_022719323.1 | sodium/hydrogen exchanger 1-like [Durio zibethinus] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P5WU19 | sodium/hydrogen exchanger 1-like OS=Durio zibethinus OX=66656 GN=LOC111277267 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology