halophFGD

Basic Information

Locus ID: nbisL1-mrna-3419

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	50656644	50663852	-	nbisL1-mrna-3419

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.72	106,849.55 Da	43.88	89.55	-0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14066	STKc_IRAK	639	906	4.80972E-94	-
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	637	904	3.2E-48	IPR001245
Pfam	PF11721	Malectin domain	372	555	4.5E-38	IPR021720
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	618	907	4.43E-79	IPR011009
SUPERFAMILY	SSF52058	L domain-like	67	352	9.52E-44	-
Gene3D	G3DSA:2.60.120.430	-	369	561	3.8E-35	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	52	211	6.7E-31	IPR032675
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	603	708	9.9E-36	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	709	914	1.2E-57	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	212	360	7.6E-19	IPR032675
SMART	SM00220	serkin_6	633	901	5.1E-37	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	633	910	38.873459	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	639	661	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	755	767	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G07650.2	Leucine-rich repeat transmembrane protein kinase.
RefSeq	XP_038995147.1	probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X1 [Hibiscus syriacus]
Swiss-Prot	C0LGE0	Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1
TrEMBL	A0A6A3B189	Putative LRR receptor-like serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110332pilonHSYRG00406 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	26	jg13615, jg19150, jg19152, jg19153, jg19154, jg19155, jg5875 ... jg19269, jg20676, jg20677, jg22196, jg22197, jg24284, jg24285, jg24289, jg24356, jg24977, jg38728, jg38729, jg38730, jg5876, jg5877, jg5879, jg5880, jg5881, jg605
Aizoaceae	Mesembryanthemum crystallinum	4	gene_22379, gene_22381, gene_7561, gene_7562
Amaranthaceae	Atriplex hortensis	6	Ah007605, Ah007606, Ah010617, Ah010618, Ah016867, Ah016871
Amaranthaceae	Beta vulgaris	4	BVRB_4g085130, BVRB_4g085150, BVRB_4g085170, BVRB_4g085180
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg19100, Sbi_jg37526, Sbi_jg37527
Amaranthaceae	Salicornia europaea	2	Seu_jg5369, Seu_jg5370
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00005211, GOSA_00005212, GOSA_00011493, GOSA_00011494
Amaranthaceae	Suaeda glauca	14	Sgl20647, Sgl21826, Sgl21850, Sgl21891, Sgl26045, Sgl27116 ... Sgl27139, Sgl27171, Sgl45590, Sgl50371, Sgl55960, Sgl55962, Sgl61132, Sgl61133
Amaranthaceae	Chenopodium album	24	gene:ENSEOMG00000008503, gene:ENSEOMG00000009676 ... gene:ENSEOMG00000009967, gene:ENSEOMG00000011257, gene:ENSEOMG00000011376, gene:ENSEOMG00000011440, gene:ENSEOMG00000011704, gene:ENSEOMG00000016258, gene:ENSEOMG00000017183, gene:ENSEOMG00000018036, gene:ENSEOMG00000025653, gene:ENSEOMG00000028201, gene:ENSEOMG00000029948, gene:ENSEOMG00000031514, gene:ENSEOMG00000032057, gene:ENSEOMG00000038773, gene:ENSEOMG00000041854, gene:ENSEOMG00000042427, gene:ENSEOMG00000043050, gene:ENSEOMG00000044206, gene:ENSEOMG00000044428, gene:ENSEOMG00000046648, gene:ENSEOMG00000050904, gene:ENSEOMG00000052471
Amaranthaceae	Chenopodium quinoa	11	CQ.Regalona.r1.4AG0017450, CQ.Regalona.r1.4AG0017460 ... CQ.Regalona.r1.4AG0017490, CQ.Regalona.r1.4BG0017840, CQ.Regalona.r1.4BG0017850, CQ.Regalona.r1.4BG0017860, CQ.Regalona.r1.4BG0017870, CQ.Regalona.r1.8AG0007720, CQ.Regalona.r1.8AG0007740, CQ.Regalona.r1.8BG0007520, CQ.Regalona.r1.9AG0014370
Anacardiaceae	Pistacia vera	20	pistato.v30021670, pistato.v30071270, pistato.v30071280 ... pistato.v30071360, pistato.v30071500, pistato.v30071580, pistato.v30071590, pistato.v30071620, pistato.v30071640, pistato.v30071650, pistato.v30071670, pistato.v30071690, pistato.v30071710, pistato.v30071720, pistato.v30071730, pistato.v30106220, pistato.v30162890, pistato.v30162900, pistato.v30162910, pistato.v30163010
Apiaceae	Apium graveolens	10	Ag11G03194, Ag11G03195, Ag11G04879, Ag11G04880, Ag2G01577 ... Ag2G02295, Ag3G00510, Ag3G00557, Ag6G01081, Ag8G00736
Arecaceae	Cocos nucifera	8	COCNU_04G010410, COCNU_04G013060, COCNU_06G003580 ... COCNU_06G003590, COCNU_06G003600, COCNU_14G002490, scaffold013660G000010, scaffold015183G000010
Arecaceae	Phoenix dactylifera	7	gene-LOC103695886, gene-LOC103695888, gene-LOC103708958 ... gene-LOC103711416, gene-LOC103723413, gene-LOC120105768, gene-LOC120110444
Asparagaceae	Asparagus officinalis	5	AsparagusV1_Unassigned.322.V1.1 ... AsparagusV1_Unassigned.323.V1.1, AsparagusV1_Unassigned.44.V1.1, AsparagusV1_Unassigned.45.V1.1, AsparagusV1_Unassigned.552.V1.1
Asteraceae	Flaveria trinervia	14	Ftri11G12514, Ftri11G25408, Ftri15G00603, Ftri15G04538 ... Ftri15G07328, Ftri15G10014, Ftri15G10085, Ftri15G23766, Ftri18G27153, Ftri18G33896, Ftri3G20757, Ftri4G31347, Ftri5G18433, FtriNA22355
Brassicaceae	Arabidopsis thaliana	10	AT1G07650.2, AT1G29720.1, AT1G29730.1, AT1G29740.1 ... AT1G29750.2, AT1G53420.1, AT1G53430.1, AT1G53440.1, AT3G14840.2, AT4G16162.1
Brassicaceae	Eutrema salsugineum	9	Thhalv10006670m.g.v1.0, Thhalv10006680m.g.v1.0 ... Thhalv10006761m.g.v1.0, Thhalv10009409m.g.v1.0, Thhalv10011204m.g.v1.0, Thhalv10012029m.g.v1.0, Thhalv10015245m.g.v1.0, Thhalv10015261m.g.v1.0, Thhalv10019958m.g.v1.0
Brassicaceae	Schrenkiella parvula	10	Sp1g06370.v2.2, Sp1g25590.v2.2, Sp1g25600.v2.2 ... Sp1g25620.v2.2, Sp1g25630.v2.2, Sp1g25640.v2.2, Sp1g39960.v2.2, Sp1g39970.v2.2, Sp1g39980.v2.2, Sp3g13050.v2.2
Brassicaceae	Brassica nigra	14	BniB01g050190.2N, BniB01g050220.2N, BniB01g050250.2N ... BniB03g016490.2N, BniB03g034100.2N, BniB04g044620.2N, BniB04g055930.2N, BniB06g027240.2N, BniB06g043010.2N, BniB06g049770.2N, BniB07g027880.2N, BniB07g027910.2N, BniB07g054630.2N, BniB07g054660.2N
Casuarinaceae	Casuarina equisetifolia	12	Ceq01G0799, Ceq01G0880, Ceq02G2530, Ceq02G2903, Ceq02G2904 ... Ceq04G0483, Ceq04G0484, Ceq04G0496, Ceq04G0501, Ceq04G0503, Ceq04G0504, Ceq07G2274
Casuarinaceae	Casuarina glauca	18	Cgl01G0559, Cgl01G0560, Cgl01G0561, Cgl01G0562, Cgl01G1006 ... Cgl01G1007, Cgl02G2617, Cgl02G3026, Cgl04G0579, Cgl04G0580, Cgl04G0581, Cgl04G0588, Cgl04G0594, Cgl04G0603, Cgl04G0606, Cgl04G0607, Cgl07G2499, Cgl07G2502
Cymodoceaceae	Cymodocea nodosa	13	gene.Cymno02g13350, gene.Cymno02g13380, gene.Cymno06g04240 ... gene.Cymno07g06770, gene.Cymno07g06780, gene.Cymno07g06790, gene.Cymno07g06800, gene.Cymno07g06820, gene.Cymno07g06830, gene.Cymno07g06840, gene.Cymno09g02080, gene.Cymno09g02120, gene.Cymno09g02360
Hydrocharitaceae	Thalassia testudinum	19	gene.Thate07g19890, gene.Thate07g19900, gene.Thate07g19910 ... gene.Thate07g19930, gene.Thate07g19940, gene.Thate07g19950, gene.Thate07g19970, gene.Thate07g19980, gene.Thate07g19990, gene.Thate07g20000, gene.Thate07g20010, gene.Thate07g20030, gene.Thate07g20040, gene.Thate07g20060, gene.Thate07g20080, gene.Thate07g20090, gene.Thate07g20100, gene.Thate07g20110, gene.Thate07g20120
Malvaceae	Hibiscus hamabo Siebold & Zucc.	9	nbisL1-mrna-10270, nbisL1-mrna-2, nbisL1-mrna-3418 ... nbisL1-mrna-3419, nbisL1-mrna-3420, nbisL1-mrna-7551, nbisL1-mrna-8300, nbisL1-mrna-8302, nbisL1-mrna-904
Nitrariaceae	Nitraria sibirica	12	evm.TU.LG05.1400, evm.TU.LG05.1402, evm.TU.LG05.1403 ... evm.TU.LG05.1405, evm.TU.LG05.1406, evm.TU.LG05.1411, evm.TU.LG12.750, evm.TU.LG12.751, evm.TU.LG12.752, evm.TU.LG12.753, evm.TU.LG12.754, evm.TU.LG12.755
Plantaginaceae	Plantago ovata	17	Pov_00002423, Pov_00004853, Pov_00004854, Pov_00004855 ... Pov_00004856, Pov_00004857, Pov_00004858, Pov_00004860, Pov_00004929, Pov_00005527, Pov_00008343, Pov_00008682, Pov_00009394, Pov_00009400, Pov_00009411, Pov_00014686, Pov_00029085
Plumbaginaceae	Limonium bicolor	5	Lb3G18071, Lb3G20365, Lb4G25490, Lb6G31002, Lb8G35943
Poaceae	Echinochloa crus-galli	9	AH03.1654, AH07.958, AH07.960, BH03.1804, BH03.1805 ... BH07.1078, CH03.1970, CH03.1971, CH07.842
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0107170, gene-QOZ80_2BG0160790 ... gene-QOZ80_2BG0160810, gene-QOZ80_6AG0532890, gene-QOZ80_6BG0486410
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.5HG0474810.1
Poaceae	Lolium multiflorum	2	gene-QYE76_004650, gene-QYE76_021839
Poaceae	Oryza coarctata	2	Oco03G006310, Oco04G006520
Poaceae	Oryza sativa	2	LOC_Os02g13850.1, LOC_Os09g17630.1
Poaceae	Paspalum vaginatum	2	gene-BS78_02G158300, gene-BS78_04G097000
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0206385, Pt_Chr0702576
Poaceae	Sporobolus alterniflorus	3	Chr06G032240, Chr0G014380, Chr15G023670
Poaceae	Thinopyrum elongatum	2	Tel2E01G028000, Tel5E01G316000
Poaceae	Triticum dicoccoides	2	gene_TRIDC5AG030260, gene_TRIDC5BG031960
Poaceae	Triticum aestivum	3	TraesCS5A02G186500.1, TraesCS5B02G184900.1 ... TraesCS5D02G191800.1
Poaceae	Zea mays	2	Zm00001eb239210_P002, Zm00001eb310470_P001
Poaceae	Zoysia japonica	3	nbis-gene-19854, nbis-gene-33331, nbis-gene-54957
Poaceae	Zoysia macrostachya	2	Zma_g12482, Zma_g32541
Portulacaceae	Portulaca oleracea	10	evm.TU.LG02.812, evm.TU.LG02.813, evm.TU.LG02.814 ... evm.TU.LG03.1362, evm.TU.LG03.1364, evm.TU.LG09.1987, evm.TU.LG09.1988, evm.TU.LG12.5, evm.TU.LG18.962, evm.TU.LG20.915
Posidoniaceae	Posidonia oceanica	32	gene.Posoc03g17640, gene.Posoc03g17650, gene.Posoc04g18050 ... gene.Posoc04g18700, gene.Posoc04g18720, gene.Posoc04g18740, gene.Posoc04g18750, gene.Posoc04g18770, gene.Posoc04g18790, gene.Posoc04g18810, gene.Posoc04g18840, gene.Posoc04g18870, gene.Posoc04g18900, gene.Posoc04g18930, gene.Posoc04g18940, gene.Posoc04g18990, gene.Posoc05g16640, gene.Posoc05g16660, gene.Posoc08g02030, gene.Posoc08g02060, gene.Posoc08g02090, gene.Posoc08g02100, gene.Posoc08g02130, gene.Posoc08g02150, gene.Posoc08g02180, gene.Posoc08g02200, gene.Posoc08g02210, gene.Posoc08g02220, gene.Posoc08g02230, gene.Posoc08g02240, gene.Posoc08g02270, gene.Posoc10g11120
Rhizophoraceae	Bruguiera sexangula	8	evm.TU.44995.2, evm.TU.Scaffold_12_RagTag.618 ... evm.TU.Scaffold_13_RagTag.259, evm.TU.Scaffold_13_RagTag.260, evm.TU.Scaffold_13_RagTag.261, evm.TU.Scaffold_5_RagTag.127, evm.TU.Scaffold_5_RagTag.129, evm.TU.Scaffold_9_RagTag.103
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-11096, nbisL1-mrna-22081, nbisL1-mrna-24096 ... nbisL1-mrna-24098, nbisL1-mrna-24103, nbisL1-mrna-30709, nbisL1-mrna-30710
Rhizophoraceae	Ceriops tagal	7	nbisL1-mrna-14577, nbisL1-mrna-14578, nbisL1-mrna-15206 ... nbisL1-mrna-16351, nbisL1-mrna-20762, nbisL1-mrna-3215, nbisL1-mrna-4445
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-10657, nbisL1-mrna-10658, nbisL1-mrna-19814 ... nbisL1-mrna-20933, nbisL1-mrna-20934, nbisL1-mrna-7586
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000003l.74, evm.TU.utg000006l.75 ... evm.TU.utg000006l.76, evm.TU.utg000015l.159, evm.TU.utg000027l.187
Rhizophoraceae	Kandelia obovata	6	Maker00013239, Maker00013929, Maker00015363, Maker00015910 ... Maker00017661, Maker00018240
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-5792, nbisL1-mrna-5793, nbisL1-mrna-5794 ... nbisL1-mrna-5938, nbisL1-mrna-6699, nbisL1-mrna-9098, nbisL1-mrna-9099
Rhizophoraceae	Rhizophora mangle	16	nbisL1-mrna-15311, nbisL1-mrna-15320, nbisL1-mrna-16866 ... nbisL1-mrna-16867, nbisL1-mrna-19140, nbisL1-mrna-19143, nbisL1-mrna-19146, nbisL1-mrna-19148, nbisL1-mrna-21636, nbisL1-mrna-24559, nbisL1-mrna-24562, nbisL1-mrna-24564, nbisL1-mrna-24565, nbisL1-mrna-24862, nbisL1-mrna-24864, nbisL1-mrna-24865
Salicaceae	Populus euphratica	29	populus_peu00748, populus_peu00760, populus_peu00763 ... populus_peu00764, populus_peu00780, populus_peu00782, populus_peu00783, populus_peu01437, populus_peu01460, populus_peu09099, populus_peu09196, populus_peu09198, populus_peu09288, populus_peu09880, populus_peu09881, populus_peu09884, populus_peu17696, populus_peu17974, populus_peu17977, populus_peu17980, populus_peu19611, populus_peu19612, populus_peu19679, populus_peu19680, populus_peu19683, populus_peu19686, populus_peu19687, populus_peu19688, populus_peu19689
Solanaceae	Lycium barbarum	9	gene-LOC132614645, gene-LOC132617159, gene-LOC132623752 ... gene-LOC132623753, gene-LOC132623754, gene-LOC132624497, gene-LOC132630444, gene-LOC132636404, gene-LOC132636406
Solanaceae	Solanum chilense	5	SOLCI002532400, SOLCI003233800, SOLCI003235100 ... SOLCI003514600, SOLCI005471400
Solanaceae	Solanum pennellii	8	gene-LOC107007460, gene-LOC107011163, gene-LOC107011164 ... gene-LOC107011165, gene-LOC107011166, gene-LOC107011290, gene-LOC107011799, gene-LOC107026370
Tamaricaceae	Reaumuria soongarica	8	STRG.3393_chr01_-, gene_4417, gene_4418, gene_4419 ... gene_4420, gene_4421, gene_5397, gene_5483
Tamaricaceae	Tamarix chinensis	5	TC02G2750, TC02G2751, TC08G0370, TC08G0373, TC08G0375
Zosteraceae	Zostera marina	12	Zosma01g02620.v3.1, Zosma03g36280.v3.1, Zosma03g36300.v3.1 ... Zosma04g20920.v3.1, Zosma04g22690.v3.1, Zosma05g00200.v3.1, Zosma06g20800.v3.1, Zosma06g20810.v3.1, Zosma06g20820.v3.1, Zosma06g20830.v3.1, Zosma587g00080.v3.1, Zosma941g00010.v3.1