Basic Information
Locus ID:
nbisL1-mrna-3417
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 6202184 | 6206205 | - | nbisL1-mrna-3417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 65,500.35 Da | 47.73 | 94.58 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 242 | 487 | 2.35E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 17 | 205 | 5.49E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 564 | 9.6E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 313 | 2.9E-15 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 532 | - | - |
| Coils | Coil | Coil | 562 | 568 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034930026.1 | probable disease resistance protein At4g27220 [Populus alba] | 0 |
| TrEMBL | A0A8X8CEW0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_044954 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology