Basic Information
Locus ID:
nbisL1-mrna-3413
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 1526186 | 1531224 | + | nbisL1-mrna-3413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 67,898.95 Da | 51.24 | 83.77 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 150 | 410 | 2.34236E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 150 | 411 | 1.3E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 147 | 442 | 1.75E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 442 | 592 | 2.22E-16 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 436 | 590 | 1.7E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 238 | 4.0E-21 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 431 | 520 | 1.7E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 420 | 1.6E-63 | - |
| SMART | SM00220 | serkin_6 | 149 | 411 | 2.0E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 149 | 411 | 50.915627 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 155 | 181 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 133 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_021658526.1 | CDPK-related kinase 5-like [Hevea brasiliensis] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | J7F6B4 | Calcium-dependent protein kinase 6 OS=Hevea brasiliensis OX=3981 GN=CDPK6 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology