Basic Information
Locus ID:
nbisL1-mrna-3404
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 1464972 | 1480671 | + | nbisL1-mrna-3404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 297,835.13 Da | 50.97 | 89.00 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 374 | 563 | 1.0E-60 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 320 | 614 | 1.22E-76 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 315 | 563 | 7.8E-76 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 564 | 621 | 9.6E-8 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 318 | 588 | 8.7E-79 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 374 | 562 | 59.218758 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 525 | 536 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 493 | 510 | 8.7E-17 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 364 | 385 | 8.7E-17 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 526 | 544 | 8.7E-17 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2427 | 2452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 151 | - | - |
| Coils | Coil | Coil | 587 | 614 | - | - |
| Coils | Coil | Coil | 2118 | 2138 | - | - |
| Coils | Coil | Coil | 863 | 883 | - | - |
| Coils | Coil | Coil | 1017 | 1037 | - | - |
| Coils | Coil | Coil | 1984 | 2011 | - | - |
| Coils | Coil | Coil | 1942 | 1969 | - | - |
| Coils | Coil | Coil | 1900 | 1920 | - | - |
| Coils | Coil | Coil | 1834 | 1854 | - | - |
| Coils | Coil | Coil | 2402 | 2422 | - | - |
| Coils | Coil | Coil | 1754 | 1812 | - | - |
| Coils | Coil | Coil | 2525 | 2580 | - | - |
| Coils | Coil | Coil | 2237 | 2278 | - | - |
| Coils | Coil | Coil | 2066 | 2093 | - | - |
| Coils | Coil | Coil | 1130 | 1150 | - | - |
| Coils | Coil | Coil | 1295 | 1315 | - | - |
| Coils | Coil | Coil | 1452 | 1472 | - | - |
| Coils | Coil | Coil | 2469 | 2489 | - | - |
| Coils | Coil | Coil | 1052 | 1079 | - | - |
| Coils | Coil | Coil | 1267 | 1287 | - | - |
| Coils | Coil | Coil | 776 | 796 | - | - |
| Coils | Coil | Coil | 2293 | 2355 | - | - |
| Coils | Coil | Coil | 971 | 991 | - | - |
| Coils | Coil | Coil | 1862 | 1889 | - | - |
| Coils | Coil | Coil | 682 | 709 | - | - |
| Coils | Coil | Coil | 2202 | 2222 | - | - |
| Coils | Coil | Coil | 891 | 946 | - | - |
| Coils | Coil | Coil | 2360 | 2397 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021639818.1 | kinesin-like protein KIN-12D [Hevea brasiliensis] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9UG72 | Kinesin motor domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_15G144100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology