Basic Information
Locus ID:
nbisL1-mrna-3402
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002179F_pilon | 3235120 | 3237756 | - | nbisL1-mrna-3402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 59,159.05 Da | 51.73 | 82.83 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 210 | 471 | 5.3E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 189 | 472 | 1.91E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 182 | 281 | 1.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 499 | 2.5E-56 | - |
| SMART | SM00220 | serkin_6 | 207 | 473 | 4.9E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 207 | 479 | 33.658016 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 213 | 235 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 126 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021688905.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Hevea brasiliensis] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5FX28 | Mitogen-activated protein kinase kinase kinase OS=Trema orientale OX=63057 GN=TorRG33x02_021450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology