Basic Information
Locus ID:
nbisL1-mrna-3402
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 6035670 | 6040480 | + | nbisL1-mrna-3402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 64,710.25 Da | 39.05 | 111.97 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 32 | 267 | 2.5E-25 | IPR006153 |
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 299 | 474 | 1.2E-20 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 147 | 199 | 2.3E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 155 | 165 | 8.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 115 | 123 | 8.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 114 | 8.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 86 | 97 | 8.6E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_021659529.1 | sodium/hydrogen exchanger 2-like [Hevea brasiliensis] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | I3NLE3 | Sodium/hydrogen exchanger OS=Bruguiera gymnorhiza OX=39984 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology