Basic Information
Locus ID:
nbisL1-mrna-3393
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
EDR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 5949167 | 5949577 | + | nbisL1-mrna-3393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 12,056.89 Da | 49.87 | 100.19 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 3 | 75 | 1.6E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 96 | 1.3E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 104 | 4.9E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 84 | 10.548924 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08720.1 | Protein kinase superfamily protein. enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum | 0 |
| RefSeq | XP_024438847.1 | - | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KCC9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000023760 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G007120, scaffold038440G000020 |
| Brassicaceae | Brassica nigra | 3 | BniB02g080230.2N, BniB04g023250.2N, BniB07g059490.2N |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.3018s00001.v1.0 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5472 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G015500 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34314 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.721 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3393 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5270 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1046 |
| Salicaceae | Populus euphratica | 1 | populus_peu28322 |