Basic Information
Locus ID:
nbisL1-mrna-3293
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002179F_pilon | 2474946 | 2478853 | - | nbisL1-mrna-3293 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 41,561.07 Da | 47.11 | 90.50 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 170 | 230 | 2.11018E-6 | - |
| Pfam | PF00651 | BTB/POZ domain | 61 | 161 | 4.4E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 252 | 337 | 2.4E-12 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 245 | 346 | 6.67E-23 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 49 | 164 | 2.35E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 48 | 168 | 7.3E-19 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 243 | 362 | 1.9E-22 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 169 | 242 | 2.4E-14 | - |
| SMART | SM00551 | TAZ_2 | 245 | 338 | 3.4E-34 | IPR000197 |
| SMART | SM00225 | BTB_4 | 68 | 168 | 5.1E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 68 | 136 | 10.881778 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 242 | 340 | 9.02489 | IPR000197 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 222 | 242 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67480.1 | BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_006380615.1 | - | 0 |
| Q9FJX5 | BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BT4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YDL1 | BTB/POZ and TAZ domain-containing protein 4 OS=Populus deltoides OX=3696 GN=H0E87_014506 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology