Basic Information
Locus ID:
nbisL1-mrna-3289
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 5069970 | 5076875 | + | nbisL1-mrna-3289 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 180,454.34 Da | 43.90 | 102.72 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 186 | 410 | 5.1E-41 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 483 | 917 | 3.5E-27 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 424 | 1.22E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 978 | 1565 | 1.05E-11 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 165 | 321 | 9.6E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 937 | 5.4E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 324 | 412 | 2.4E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1372 | 1582 | 1.9E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1126 | 1287 | 3.3E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 947 | 1114 | 3.0E-7 | IPR032675 |
| SMART | SM00382 | AAA_5 | 188 | 325 | 0.0045 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 632 | 648 | 7.0E-22 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 357 | 371 | 7.0E-22 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 191 | 206 | 7.0E-22 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 264 | 278 | 7.0E-22 | - |
| Coils | Coil | Coil | 57 | 77 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27220.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021685020.1 | - | 0 |
| O81825 | Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6KFC6 | SET domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_001384 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology