Basic Information
Locus ID:
nbisL1-mrna-31871
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold0094 | 19906 | 21207 | + | nbisL1-mrna-31871 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 45,989.21 Da | 40.98 | 103.65 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 80 | 9.7E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 203 | 1.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 404 | 1.7E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 213 | 1.8E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 409 | 8.7E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 0.26 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 362 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 23.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.00349 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012091242.1 | receptor-like protein 12 [Jatropha curcas] | 0 |
| TrEMBL | A0A067JA93 | LRRNT_2 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology