Basic Information
Locus ID:
nbisL1-mrna-3185
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2718522 | 2722759 | - | nbisL1-mrna-3185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 47,235.89 Da | 33.48 | 109.28 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 280 | 418 | 8.8E-22 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 244 | 7.0E-23 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 422 | 1.9E-20 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 118 | 259 | 4.4E-15 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 71 | 421 | 1.5E-102 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 61 | 421 | 2.1E-118 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021668448.1 | vacuolar cation/proton exchanger 3-like isoform X2 [Hevea brasiliensis] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2LPJ6 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology