Basic Information
Locus ID:
nbisL1-mrna-317
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 1759508 | 1762042 | + | nbisL1-mrna-317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 44,974.81 Da | 44.78 | 80.75 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 51 | 294 | 8.3E-24 | IPR024788 |
| Gene3D | G3DSA:2.60.120.430 | - | 48 | 203 | 8.0E-20 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39020.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_021670697.1 | receptor-like protein kinase FERONIA [Hevea brasiliensis] | 0 |
| Q9FID6 | Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana OX=3702 GN=At5g39020 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6K3F0 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_043684 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0463 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0413 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023687 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_6_RagTag.373, evm.TU.Scaffold_6_RagTag.389 ... |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15255 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-317 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.100 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006847 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-18378, nbisL1-mrna-21417, nbisL1-mrna-21418 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-17235, nbisL1-mrna-22174 |