Basic Information
Locus ID:
nbisL1-mrna-3159
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 3080236 | 3083246 | - | nbisL1-mrna-3159 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.42 | 22,000.05 Da | 50.81 | 73.28 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 164 | 200 | 4.41391E-18 | - |
| Pfam | PF01849 | NAC domain | 63 | 118 | 5.3E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 161 | 200 | 1.0E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 69 | 122 | 4.6E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 162 | 199 | 1.6E-19 | - |
| SMART | SM01407 | NAC_2 | 63 | 119 | 9.5E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 60 | 125 | 17.312428 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 163 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_042940509.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Carya illinoinensis] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K4T4 | NAC-A/B domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology