Basic Information
Locus ID:
nbisL1-mrna-3103
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000060F_pilon | 7080030 | 7082361 | + | nbisL1-mrna-3103 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 25,425.60 Da | 37.90 | 66.32 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 7 | 37 | 1.4E-4 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 3 | 56 | 3.14E-10 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 1 | 62 | 4.5E-10 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 1 | 56 | 15.149321 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 92 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14490.4 | - | 0 |
| RefSeq | XP_015576184.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Ricinus communis] | 0 |
| Q9M0F8 | NAC domain-containing protein 75 OS=Arabidopsis thaliana OX=3702 GN=NAC075 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2ZP87 | NAC domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_000880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology