Basic Information
Locus ID:
nbisL1-mrna-31015
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold0001 | 153086 | 155786 | + | nbisL1-mrna-31015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 70,657.60 Da | 35.63 | 94.52 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 384 | 644 | 2.823E-90 | - |
| CDD | cd12087 | TM_EGFR-like | 270 | 309 | 0.00140697 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 382 | 643 | 7.9E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 169 | 5.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 34 | 2.2E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 643 | 8.52E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 9 | 204 | 3.34E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 650 | 2.6E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 456 | 4.1E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 143 | 2.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 217 | 3.6E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 378 | 650 | 31.862995 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | 5.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021691505.1 | LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2J7X7 | Uncharacterized protein MANES_01G073800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology