Basic Information
Locus ID:
nbisL1-mrna-3083
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 3818788 | 3821000 | - | nbisL1-mrna-3083 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 72,719.45 Da | 38.10 | 90.87 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 357 | 621 | 1.4E-31 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 9.9E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 187 | 4.3E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 236 | 1.02E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 626 | 3.74E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 641 | 5.2E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 240 | 2.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 427 | 1.9E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 197 | 2.9E-34 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 635 | 28.470835 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034899585.1 | pollen receptor-like kinase 4 [Populus alba] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5N905 | Leucine-rich repeat transmembrane protein kinase OS=Populus alba OX=43335 GN=D5086_0000278840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology