Basic Information
Locus ID:
nbisL1-mrna-3082
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000060F_pilon | 6931457 | 6936955 | - | nbisL1-mrna-3082 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 71,421.29 Da | 47.58 | 81.75 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 513 | 627 | 1.1E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 319 | 509 | 7.2E-19 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 512 | 628 | 2.81E-17 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 39 | 97 | 6.7E-6 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 98 | 145 | 1.6E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 303 | 400 | 1.8E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 509 | 638 | 8.5E-26 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 512 | 642 | 20.913939 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 307 | 636 | 130.454086 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_012072470.1 | DNA (cytosine-5)-methyltransferase DRM2 [Jatropha curcas] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KN91 | SAM-dependent MTase DRM-type domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology