Basic Information
Locus ID:
nbisL1-mrna-30770
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 21767407 | 21772258 | - | nbisL1-mrna-30770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 76,944.37 Da | 43.80 | 95.84 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 2.7E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 495 | 667 | 4.6E-8 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 239 | 1.16E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 494 | 685 | 2.86E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 679 | 1.4E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 260 | 3.1E-37 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 671 | 10.308646 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 377 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_021660258.1 | protein MALE DISCOVERER 2-like isoform X1 [Hevea brasiliensis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6M749 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology