Basic Information
Locus ID:
nbisL1-mrna-3077
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41391487 | 41399416 | - | nbisL1-mrna-3077 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 145,635.16 Da | 47.07 | 75.48 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 181 | 276 | 3.81912E-42 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1045 | 1294 | 1.03169E-109 | - |
| Pfam | PF00564 | PB1 domain | 193 | 277 | 2.3E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1041 | 1298 | 8.8E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 194 | 283 | 2.52E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1031 | 1298 | 1.37E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 196 | 278 | 1.1E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1032 | 1126 | 8.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1127 | 1320 | 1.1E-51 | - |
| SMART | SM00666 | PB1_new | 192 | 278 | 5.5E-31 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1039 | 1301 | 5.9E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1039 | 1301 | 39.679096 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1045 | 1070 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1164 | 1176 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1269 | 1291 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1158 | 1176 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1121 | 1134 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1225 | 1247 | 1.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 784 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_039049001.1 | uncharacterized protein LOC120189939 isoform X2 [Hibiscus syriacus] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6USC5 | Mitogen-activated protein kinase kinase kinase 13-A OS=Gossypium australe OX=47621 GN=EPI10_027603 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology