Basic Information
Locus ID:
nbisL1-mrna-306
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 1696761 | 1700186 | + | nbisL1-mrna-306 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 123,652.85 Da | 35.71 | 98.51 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 869 | 1136 | 2.02634E-86 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 268 | 290 | 0.03 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 415 | 437 | 0.23 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 81 | 4.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 174 | 233 | 2.7E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 866 | 1061 | 1.6E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 626 | 685 | 1.4E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 316 | 338 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 846 | 1133 | 4.59E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 140 | 486 | 2.67E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 557 | 739 | 6.12E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 358 | 500 | 3.8E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 244 | 1.4E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 826 | 938 | 4.9E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 357 | 2.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 523 | 762 | 2.6E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 939 | 1139 | 2.6E-55 | - |
| SMART | SM00220 | serkin_6 | 863 | 1140 | 1.3E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 624 | 647 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 672 | 695 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 696 | 720 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 100.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 674 | 697 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 863 | 1136 | 38.081955 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 982 | 994 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 869 | 891 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 269 | 282 | 4.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 672 | 685 | 4.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_021633344.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Manihot esculenta] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M9E5 | Uncharacterized protein MANES_01G096300 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology