Basic Information
Locus ID:
nbisL1-mrna-30265
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 15604653 | 15610828 | - | nbisL1-mrna-30265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 111,510.98 Da | 37.71 | 100.28 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 43 | 311 | 1.4E-28 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 706 | 972 | 3.1E-30 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 378 | 583 | 5.4E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 693 | 982 | 1.18E-56 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 656 | 8.28E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 326 | 9.7E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 985 | 2.5E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 326 | 2.4E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 654 | 1.2E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 778 | 3.0E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 118 | 5.0E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 448 | 1.1E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 647 | 27.509724 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 977 | 27.241177 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 318 | 27.509724 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07870.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002298384.2 | - | 0 |
| Q9LQQ8 | Probable serine/threonine-protein kinase PBL5 OS=Arabidopsis thaliana OX=3702 GN=PBL5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J9KV08 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-30263, nbisL1-mrna-30265 |