Basic Information
Locus ID:
nbisL1-mrna-30262
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase PSK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 15592631 | 15593643 | + | nbisL1-mrna-30262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 23,463.56 Da | 45.23 | 91.35 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 17 | 197 | 1.5E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 198 | 7.15E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 207 | 7.0E-48 | - |
| SMART | SM00220 | serkin_6 | 1 | 205 | 2.9E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 205 | 23.764214 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 37 | 49 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11020.3 | - | 0 |
| RefSeq | XP_028946995.1 | - | 0 |
| Q9SGY7 | Putative proline-rich receptor-like protein kinase PERK11 OS=Arabidopsis thaliana OX=3702 GN=PERK11 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J7N9E8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-30262, nbisL1-mrna-30264 |