Basic Information
Locus ID:
nbisL1-mrna-30115
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 14358868 | 14361705 | + | nbisL1-mrna-30115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 50,073.60 Da | 42.61 | 79.23 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 133 | 401 | 4.93334E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 128 | 399 | 1.1E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 100 | 404 | 1.03E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 85 | 204 | 1.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 425 | 1.6E-56 | - |
| SMART | SM00220 | serkin_6 | 127 | 401 | 9.6E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 403 | 40.611942 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 249 | 261 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 155 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58940.1 | calmodulin-binding receptor-like cytoplasmic kinase 1. Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA | 0 |
| RefSeq | XP_048232325.1 | calmodulin-binding receptor-like cytoplasmic kinase 1 [Ricinus communis] | 0 |
| Q9FIL7 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K974 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology