Basic Information
Locus ID:
nbisL1-mrna-301
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 1797513 | 1800760 | - | nbisL1-mrna-301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 96,928.10 Da | 35.82 | 101.37 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 488 | 543 | 3.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 72 | 1.6E-7 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 291 | 306 | 1.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 710 | 798 | 1.1E-13 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 226 | 590 | 7.85E-74 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 693 | 800 | 2.11E-20 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 309 | 4.42E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 146 | 5.6E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 700 | 814 | 6.9E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 213 | 1.4E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 254 | 5.5E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 353 | 7.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 627 | 1.5E-76 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 314 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 290 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 34.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 508 | 530 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 883 | 14.84566 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 436 | 458 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 714 | 738 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 7.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 293 | 306 | 7.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_048236074.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Ricinus communis] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2WJ42 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology