Basic Information
Locus ID:
nbisL1-mrna-29980
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 13191280 | 13195244 | + | nbisL1-mrna-29980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 59,806.89 Da | 39.84 | 82.90 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 60 | 318 | 1.61155E-141 | - |
| CDD | cd00051 | EFh | 438 | 500 | 2.61176E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 437 | 500 | 2.4E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 367 | 425 | 2.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 319 | 3.6E-77 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 348 | 525 | 1.92E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 333 | 2.83E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 328 | 502 | 6.5E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 327 | 5.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 146 | 7.3E-29 | - |
| SMART | SM00054 | efh_1 | 402 | 430 | 0.42 | IPR002048 |
| SMART | SM00054 | efh_1 | 438 | 466 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 1.8E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 61 | 319 | 5.5E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 366 | 394 | 0.01 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 13.258112 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 9.408546 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 319 | 49.996918 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 362 | 397 | 11.974924 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 67 | 90 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_034893626.1 | calcium-dependent protein kinase 7-like [Populus alba] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4V6ABT7 | Calcium-dependent protein kinase 1 OS=Populus alba OX=43335 GN=D5086_0000024890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology