Basic Information
Locus ID:
nbisL1-mrna-29911
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein STRUBBELIG-RECEPTOR FAMILY 3-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 12314892 | 12320921 | - | nbisL1-mrna-29911 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 80,490.13 Da | 44.76 | 95.09 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 122 | 180 | 1.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 458 | 628 | 8.1E-26 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 216 | 1.41E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 732 | 1.64E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 230 | 7.5E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 735 | 2.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 120 | 9.8E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 415 | 529 | 2.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 736 | 26.152859 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 169 | 191 | 7.119001 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 460 | 483 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_012091538.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Jatropha curcas] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067JDS1 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_21384 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology