Basic Information
Locus ID:
nbisL1-mrna-29902
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 12077234 | 12090112 | + | nbisL1-mrna-29902 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 178,285.89 Da | 47.30 | 101.90 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 562 | 1044 | 3.13E-15 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 310 | 1.19E-14 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1082 | 1279 | 6.91E-5 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 243 | 534 | 6.36E-19 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1270 | 1521 | 6.46E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1070 | 1270 | 1.7E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1353 | 1523 | 3.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 386 | 539 | 3.8E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 132 | 6.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 556 | 727 | 6.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 728 | 1015 | 2.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 379 | 2.7E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 228 | 1.2E-5 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024438815.2 | uncharacterized protein LOC18104040 [Populus trichocarpa] | 0 |
| TrEMBL | A0A2P2MRK2 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology