Basic Information
Locus ID:
nbisL1-mrna-2971
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 1883209 | 1883918 | - | nbisL1-mrna-2971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 17,916.33 Da | 28.24 | 86.91 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 23 | 119 | 6.32513E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 33 | 109 | 1.9E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 21 | 119 | 1.57E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 20 | 122 | 2.0E-31 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 23 | 121 | 35.115559 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_002325851.1 | - | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | B9IPS6 | Phytocyanin domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G037800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology