Basic Information
Locus ID:
nbisL1-mrna-2968
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Membrane-anchored ubiquitin-fold protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 5024321 | 5026452 | + | nbisL1-mrna-2968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 12,838.73 Da | 32.90 | 90.93 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 94 | 7.68985E-52 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 116 | 1.0E-43 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 98 | 9.64E-29 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 3.2E-43 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 5.5E-50 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 10.200985 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_021656841.1 | membrane-anchored ubiquitin-fold protein 6-like isoform X1 [Hevea brasiliensis] | 0 |
| Q8GWJ6 | Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2N3Z9 | Membrane-anchored ubiquitin-fold protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology