Basic Information
Locus ID:
nbisL1-mrna-2967
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002179F_pilon | 267742 | 270086 | + | nbisL1-mrna-2967 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 24,044.45 Da | 65.63 | 76.28 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 21 | 85 | 5.6E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 205 | 1.8E-5 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048230926.1 | probable serine/threonine-protein kinase PBL11 [Ricinus communis] | 0 |
| TrEMBL | A0A8T2YSS1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30211530 |
| Apiaceae | Apium graveolens | 1 | Ag7G02425 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G015190 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708723 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2197.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G01419 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0118 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10445 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001039 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.65 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16983 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13644 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11680 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.1318 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15692 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2967 |
| Salicaceae | Populus euphratica | 1 | populus_peu14081 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623240 |
| Solanaceae | Solanum chilense | 1 | SOLCI002961600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011150 |