Basic Information
Locus ID:
nbisL1-mrna-2955
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002179F_pilon | 194565 | 201500 | - | nbisL1-mrna-2955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 60,476.61 Da | 45.11 | 80.76 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 301 | 494 | 5.12171E-111 | - |
| CDD | cd04928 | ACT_TyrKc | 180 | 246 | 3.15255E-31 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 497 | 5.4E-61 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 180 | 246 | 8.74E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 531 | 1.33E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 533 | 9.2E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 373 | 1.4E-29 | - |
| SMART | SM00220 | serkin_6 | 295 | 537 | 3.4E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 537 | 41.41758 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 182 | 256 | 11.732557 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 412 | 424 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 471 | 493 | 9.6E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 369 | 382 | 9.6E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 406 | 424 | 9.6E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 452 | 462 | 9.6E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 27 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35780.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_012065330.1 | serine/threonine-protein kinase STY17 isoform X1 [Jatropha curcas] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LPG3 | Serine/threonine-protein kinase STY17-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology