Basic Information
Locus ID:
nbisL1-mrna-29467
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 5544203 | 5548010 | - | nbisL1-mrna-29467 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 55,337.99 Da | 46.16 | 79.18 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 189 | 438 | 2.11094E-120 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 188 | 438 | 1.3E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 438 | 3.37E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 267 | 458 | 1.3E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 170 | 266 | 1.8E-21 | - |
| SMART | SM00220 | serkin_6 | 182 | 441 | 1.7E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 182 | 442 | 42.463497 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 306 | 318 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 300 | 318 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 262 | 275 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 409 | 431 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 346 | 356 | 2.3E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 365 | 387 | 2.3E-18 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 148 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020540998.1 | serine/threonine/tyrosine-protein kinase HT1 [Jatropha curcas] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRC4 | Uncharacterized protein MANES_17G046400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology