Basic Information
Locus ID:
nbisL1-mrna-294
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2447277 | 2450815 | + | nbisL1-mrna-294 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 72,192.69 Da | 44.54 | 102.86 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 589 | 611 | 0.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 296 | 319 | 0.065 | IPR001611 |
| Pfam | PF00646 | F-box domain | 93 | 136 | 2.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 89 | 131 | 2.62E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 205 | 447 | 5.69E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 333 | 673 | 1.49E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 284 | 5.4E-22 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 88 | 134 | 1.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 473 | 673 | 4.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 472 | 8.4E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 219 | 244 | 0.004 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 509 | 534 | 0.05 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 589 | 613 | 0.008 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 245 | 270 | 1.6E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 271 | 296 | 0.0054 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 536 | 561 | 710.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 429 | 454 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 377 | 402 | 35.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 97 | 138 | 4.4E-5 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 297 | 322 | 6.0E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 563 | 588 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 403 | 428 | 0.03 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 615 | 640 | 0.19 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 483 | 508 | 2.2 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_039007927.1 | EIN3-binding F-box protein 1-like [Hibiscus syriacus] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3CSS9 | EIN3-binding F-box protein 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001825pilonHSYRG00131 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology