Basic Information
Locus ID:
nbisL1-mrna-29299
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 42554725 | 42556986 | - | nbisL1-mrna-29299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 84,793.03 Da | 36.86 | 64.65 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 67 | 120 | 5.34931E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 483 | 689 | 1.4E-75 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 67 | 128 | 5.8E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 60 | 127 | 7.85E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 152 | 3.6E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 66 | 123 | 2.2E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 67 | 131 | 16.599424 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 108 | 127 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 103 | 123 | 4.2E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 69 | 87 | 4.2E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 87 | 102 | 4.2E-9 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 262 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_015571313.2 | uncharacterized protein LOC8274377 isoform X1 [Ricinus communis] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | B9RIK9 | Heat shock protein binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1580150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology